STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_2085PFAM: polysaccharide deacetylase; KEGG: mmc:Mmcs_2039 polysaccharide deacetylase. (304 aa)    
Predicted Functional Partners:
alc
PFAM: allantoicase repeat-containing protein; KEGG: mmc:Mmcs_4781 allantoicase; Belongs to the allantoicase family.
 
 
 0.659
Mkms_1023
PFAM: Asp/Glu racemase; KEGG: mmc:Mmcs_1006 Asp/Glu racemase.
 
     0.643
Mkms_2084
Deoxyribodipyrimidine photo-lyase type I; PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: mmc:Mmcs_2038 deoxyribodipyrimidine photolyase.
     
 0.564
Mkms_2083
KEGG: mmc:Mmcs_2037 putative conserved transmembrane protein.
       0.506
Mkms_4866
KEGG: mmc:Mmcs_4780 hypothetical protein.
 
    0.452
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
  
 0.414
Mkms_0415
Cellulose synthase (UDP-forming); PFAM: glycosyl transferase, family 2; KEGG: mmc:Mmcs_0406 cellulose synthase (UDP-forming).
  
  
 0.407
Mkms_0547
KEGG: mmc:Mmcs_0535 hypothetical protein.
  
  
 0.407
Mkms_1021
PFAM: glycosyl transferase, family 2; KEGG: mmc:Mmcs_1004 glycosyl transferase, family 2.
  
  
 0.407
Mkms_3170
PFAM: glycosyl transferase, family 2; KEGG: mmc:Mmcs_3110 glycosyl transferase, family 2.
  
  
 0.407
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.