STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_2176KEGG: mmc:Mmcs_2130 hypothetical protein. (64 aa)    
Predicted Functional Partners:
Mkms_2175
PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; KEGG: mmc:Mmcs_2129 UDP-glucuronosyl/UDP-glucosyltransferase.
       0.868
Mkms_2174
PFAM: Limonene-1,2-epoxide hydrolase; KEGG: mmc:Mmcs_2128 limonene-1,2-epoxide hydrolase.
 
     0.786
Mkms_2457
TIGRFAM: OpcA protein; KEGG: mmc:Mmcs_2411 OpcA protein.
  
     0.605
rpsT
SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.
      
 0.584
nucS
Protein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
      
 0.584
Mkms_5487
PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_5398 NUDIX hydrolase; Belongs to the Nudix hydrolase family.
  
   
 0.569
crgA
Protein of unknown function UPF0233; Involved in cell division; Belongs to the CrgA family.
  
     0.523
Mkms_2814
PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: mmc:Mmcs_2770 CMP/dCMP deaminase, zinc-binding protein.
  
   
 0.482
Mkms_2622
KEGG: mmc:Mmcs_2577 hypothetical protein.
       0.468
Mkms_1399
PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: mmc:Mmcs_1381 biotin/lipoyl attachment.
      
 0.459
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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