STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_2266PFAM: AFG1-family ATPase; KEGG: mmc:Mmcs_2220 AFG1-like ATPase. (349 aa)    
Predicted Functional Partners:
Mkms_1247
PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: mmc:Mmcs_1230 succinate dehydrogenase, cytochrome b subunit.
 
   
 0.820
Mkms_2412
KEGG: mmc:Mmcs_2365 putative export or membrane protein.
  
    0.798
Mkms_1244
TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: mmc:Mmcs_1227 succinate dehydrogenase and fumarate reductase iron-sulfur protein.
 
  
 0.795
Mkms_1246
KEGG: mmc:Mmcs_1229 putative succinate dehydrogenase (hydrophobic membrane anchor subunit) SdhD (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase).
 
     0.791
Mkms_2154
PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: mmc:Mmcs_2108 tetratricopeptide TPR_2.
  
     0.774
Mkms_3026
KEGG: mmc:Mmcs_2982 hypothetical protein.
  
     0.773
Mkms_1245
KEGG: mmc:Mmcs_1228 succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
 
    0.770
Mkms_2265
PFAM: bifunctional deaminase-reductase domain protein; KEGG: mmc:Mmcs_2219 bifunctional deaminase-reductase-like protein.
       0.758
Mkms_2263
KEGG: mmc:Mmcs_2217 putative conserved integral membrane protein.
       0.628
Mkms_2264
TAP domain protein; PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: mmc:Mmcs_2218 TAP-like protein.
       0.619
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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