Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Mkms_0194 | Mkms_2579 | PFAM: Amidohydrolase 3; KEGG: mmc:Mmcs_0185 amidohydrolase 3. | PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2534 amidohydrolase 2. | 0.688 |
Mkms_0194 | Mkms_2584 | PFAM: Amidohydrolase 3; KEGG: mmc:Mmcs_0185 amidohydrolase 3. | Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: mmc:Mmcs_2539 hypothetical protein; TC 3.A.1.4.-. | 0.411 |
Mkms_0194 | Mkms_3732 | PFAM: Amidohydrolase 3; KEGG: mmc:Mmcs_0185 amidohydrolase 3. | PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_3659 protein of unknown function DUF35. | 0.493 |
Mkms_0194 | Mkms_3759 | PFAM: Amidohydrolase 3; KEGG: mmc:Mmcs_0185 amidohydrolase 3. | PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3686 amidohydrolase 2. | 0.470 |
Mkms_0194 | Mkms_3761 | PFAM: Amidohydrolase 3; KEGG: mmc:Mmcs_0185 amidohydrolase 3. | KEGG: mmc:Mmcs_3688 hypothetical protein. | 0.477 |
Mkms_0194 | Mkms_3765 | PFAM: Amidohydrolase 3; KEGG: mmc:Mmcs_0185 amidohydrolase 3. | PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_3692 protein of unknown function DUF35. | 0.476 |
Mkms_0194 | Mkms_3766 | PFAM: Amidohydrolase 3; KEGG: mmc:Mmcs_0185 amidohydrolase 3. | KEGG: mmc:Mmcs_3693 hypothetical protein. | 0.495 |
Mkms_0194 | Mkms_3903 | PFAM: Amidohydrolase 3; KEGG: mmc:Mmcs_0185 amidohydrolase 3. | KEGG: mmc:Mmcs_3829 hypothetical protein. | 0.780 |
Mkms_0194 | Mkms_4495 | PFAM: Amidohydrolase 3; KEGG: mmc:Mmcs_0185 amidohydrolase 3. | PFAM: NHL repeat containing protein; SMP-30/Gluconolaconase/LRE domain protein; KEGG: mmc:Mmcs_4408 NHL repeat. | 0.533 |
Mkms_2579 | Mkms_0194 | PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2534 amidohydrolase 2. | PFAM: Amidohydrolase 3; KEGG: mmc:Mmcs_0185 amidohydrolase 3. | 0.688 |
Mkms_2579 | Mkms_2580 | PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2534 amidohydrolase 2. | PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_2535 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.759 |
Mkms_2579 | Mkms_2584 | PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2534 amidohydrolase 2. | Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: mmc:Mmcs_2539 hypothetical protein; TC 3.A.1.4.-. | 0.620 |
Mkms_2579 | Mkms_3732 | PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2534 amidohydrolase 2. | PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_3659 protein of unknown function DUF35. | 0.608 |
Mkms_2579 | Mkms_3759 | PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2534 amidohydrolase 2. | PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3686 amidohydrolase 2. | 0.614 |
Mkms_2579 | Mkms_3761 | PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2534 amidohydrolase 2. | KEGG: mmc:Mmcs_3688 hypothetical protein. | 0.630 |
Mkms_2579 | Mkms_3765 | PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2534 amidohydrolase 2. | PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_3692 protein of unknown function DUF35. | 0.600 |
Mkms_2579 | Mkms_3766 | PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2534 amidohydrolase 2. | KEGG: mmc:Mmcs_3693 hypothetical protein. | 0.611 |
Mkms_2579 | Mkms_3903 | PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2534 amidohydrolase 2. | KEGG: mmc:Mmcs_3829 hypothetical protein. | 0.738 |
Mkms_2579 | Mkms_4495 | PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2534 amidohydrolase 2. | PFAM: NHL repeat containing protein; SMP-30/Gluconolaconase/LRE domain protein; KEGG: mmc:Mmcs_4408 NHL repeat. | 0.718 |
Mkms_2580 | Mkms_2579 | PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_2535 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2534 amidohydrolase 2. | 0.759 |
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