STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_2586PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_2541 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (348 aa)    
Predicted Functional Partners:
Mkms_2584
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: mmc:Mmcs_2539 hypothetical protein; TC 3.A.1.4.-.
 
     0.959
Mkms_2587
PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_2542 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.916
Mkms_2585
KEGG: mmc:Mmcs_2540 hypothetical protein.
       0.874
Mkms_2588
PFAM: cytochrome P450; KEGG: mmc:Mmcs_2543 cytochrome P450.
 
 
 0.769
Mkms_3855
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_3782 short-chain dehydrogenase/reductase SDR.
 
 
 
 0.757
Mkms_4494
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4407 short-chain dehydrogenase/reductase SDR.
 
 
 
 0.755
Mkms_2582
PFAM: von Willebrand factor, type A; KEGG: mmc:Mmcs_2537 von Willebrand factor, type A.
 
     0.732
Mkms_2593
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2548 transcriptional regulator, TetR family.
 
     0.724
Mkms_5020
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4932 short-chain dehydrogenase/reductase SDR.
 
 
 
 0.720
Mkms_2583
PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: mmc:Mmcs_2538 ATPase associated with various cellular activities, AAA_5.
       0.708
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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