STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_2795KEGG: mmc:Mmcs_2751 short chain dehydrogenase. (307 aa)    
Predicted Functional Partners:
Mkms_3721
Fatty acid synthase, bacterial type; PFAM: beta-ketoacyl synthase; acyl transferase domain protein; MaoC domain protein dehydratase; domain of unknown function DUF1729; KEGG: mmc:Mmcs_3648 MaoC-like dehydratase.
  
 0.659
Mkms_2794
PFAM: dienelactone hydrolase; KEGG: mmc:Mmcs_2750 dienelactone hydrolase.
  
   0.625
Mkms_2797
Limonene-1,2-epoxide hydrolase; PFAM: protein of unknown function DUF1486; Limonene-1,2-epoxide hydrolase; KEGG: mmc:Mmcs_2753 limonene-1,2-epoxide hydrolase.
       0.582
Mkms_2796
KEGG: mmc:Mmcs_2752 hypothetical protein.
       0.565
Mkms_1085
PFAM: cyclic nucleotide-binding; ATP-binding region, ATPase domain protein domain protein; KEGG: mmc:Mmcs_1069 cyclic nucleotide-binding protein.
  
 0.509
Mkms_0058
KEGG: mmc:Mmcs_0049 hypothetical protein.
  
 
 0.503
Mkms_2535
PFAM: cyclic nucleotide-binding; KEGG: mmc:Mmcs_2490 cyclic nucleotide-binding protein.
  
 0.489
Mkms_3426
KEGG: mmc:Mmcs_3364 (acyl-carrier protein) S-malonyltransferase.
  
 
 0.489
Mkms_4370
PFAM: GCN5-related N-acetyltransferase; cyclic nucleotide-binding; KEGG: mmc:Mmcs_4284 cyclic nucleotide-binding protein.
  
 0.489
Mkms_4904
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: mmc:Mmcs_4818 transcriptional regulator, Crp/Fnr family.
  
 0.489
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.