STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylB-2TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: mmc:Mmcs_2788 xylulokinase. (493 aa)    
Predicted Functional Partners:
Mkms_2432
PFAM: ribulose-phosphate 3-epimerase; KEGG: mmc:Mmcs_2385 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
 0.921
Mkms_2826
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: mmc:Mmcs_2782 inner-membrane translocator; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.865
Mkms_2827
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_2783 ABC transporter related; TC 3.A.1.2.-.
 
  
 0.851
Mkms_2828
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_2784 alcohol dehydrogenase GroES-like protein.
 
  
 0.844
Mkms_2830
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_2786 alcohol dehydrogenase GroES-like protein.
 
  
 0.842
Mkms_2831
PFAM: ribulose-phosphate 3-epimerase; KEGG: mmc:Mmcs_2787 ribulose-phosphate 3-epimerase.
  
 
 0.821
Mkms_2833
PFAM: sugar isomerase (SIS); KEGG: mmc:Mmcs_2789 sugar isomerase (SIS).
  
  
 0.812
Mkms_2829
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_2785 short-chain dehydrogenase/reductase SDR.
  
  
 0.797
Mkms_2825
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: mmc:Mmcs_2781 periplasmic binding protein/LacI transcriptional regulator; TC 3.A.1.2.-.
 
  
 0.764
Mkms_2834
Transcriptional regulator, DeoR family; PFAM: putative sugar-binding domain protein; KEGG: mmc:Mmcs_2790 transcriptional regulator, DeoR family.
 
  
 0.712
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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