STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_3232PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_3170 NUDIX hydrolase; Belongs to the Nudix hydrolase family. (155 aa)    
Predicted Functional Partners:
Mkms_3231
PFAM: helix-turn-helix domain protein; KEGG: mmc:Mmcs_3169 hypothetical protein.
 
    0.941
Mkms_3230
KEGG: mmc:Mmcs_3168 regulatory protein.
 
     0.663
Mkms_3233
TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: mmc:Mmcs_5596 metal dependent phosphohydrolase.
 
     0.605
Mkms_3229
PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: mmc:Mmcs_3167 cell division FtsK/SpoIIIE.
 
  
 0.577
Mkms_3228
KEGG: mmc:Mmcs_3166 putative plasmid replication initiator protein.
 
   
 0.570
Mkms_4904
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: mmc:Mmcs_4818 transcriptional regulator, Crp/Fnr family.
 
  
 0.442
Mkms_3802
PFAM: NAD-dependent epimerase/dehydratase; Male sterility C-terminal domain; KEGG: mmc:Mmcs_3729 NAD-dependent epimerase/dehydratase.
 
    0.416
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.