STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_3254KEGG: mmc:Mmcs_3192 flavoprotein involved in K+ transport-like protein. (130 aa)    
Predicted Functional Partners:
Mkms_3251
KEGG: mmc:Mmcs_3189 cyclohexanone monooxygenase.
 
     0.973
Mkms_3255
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mmc:Mmcs_3193 alpha/beta hydrolase fold-3.
 
  
 0.633
Mkms_3256
KEGG: mmc:Mmcs_3194 putative monooxygenase.
 
    
0.611
Mkms_5289
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_5201 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
     0.537
Mkms_2978
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_2934 FAD dependent oxidoreductase.
  
     0.513
Mkms_3257
KEGG: mmc:Mmcs_3195 putative monooxygenase.
 
    
0.505
Mkms_3258
KEGG: mmc:Mmcs_3196 hypothetical protein.
       0.494
Mkms_3259
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3197 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.488
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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