STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_3385PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mmc:Mmcs_3323 serine phosphatase. (550 aa)    
Predicted Functional Partners:
Mkms_3387
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mmc:Mmcs_3325 anti-sigma-factor antagonist.
 
 
 0.969
Mkms_3386
PFAM: cobalamin B12-binding domain protein; KEGG: mmc:Mmcs_3324 cobalamin B12-binding protein.
 
   
 0.960
Mkms_5245
PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: mmc:Mmcs_5156 putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
 
 0.772
Mkms_0360
KEGG: mmc:Mmcs_0350 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Stage II sporulation E family protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; protein phosphatase 2C domain protein.
 
 
0.757
Mkms_0416
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mmc:Mmcs_0407 anti-sigma-factor antagonist.
 
 
 0.755
Mkms_2733
Multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; CHASE3 domain protein; KEGG: mmc:Mmcs_2689 multi-sensor signal transduction histidine kinase.
 
  
 0.743
Mkms_2757
KEGG: mmc:Mmcs_2713 putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
 
 0.666
Mkms_5248
PFAM: cobalamin B12-binding domain protein; KEGG: mmc:Mmcs_5159 twin-arginine translocation pathway signal.
 
   
 0.659
Mkms_2776
KEGG: mmc:Mmcs_2732 hypothetical protein.
 
 
 0.631
Mkms_0807
KEGG: mmc:Mmcs_0792 hypothetical protein.
 
 
 0.630
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.