STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_3574PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_3501 binding-protein-dependent transport systems inner membrane component. (227 aa)    
Predicted Functional Partners:
metN
ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.999
Mkms_3575
PFAM: NLPA lipoprotein; KEGG: mmc:Mmcs_3503 NlpA lipoprotein.
 0.999
Mkms_3576
KEGG: mmc:Mmcs_3504 putative monooxygenase.
 
    0.795
Mkms_3571
Alkanesulfonate monooxygenase; PFAM: luciferase family protein; KEGG: mmc:Mmcs_3498 alkanesulfonate monooxygenase.
  
    0.582
Mkms_3572
KEGG: mmc:Mmcs_3499 coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases-like protein.
  
    0.582
Mkms_3570
KEGG: mmc:Mmcs_3497 GCN5-related N-acetyltransferase.
       0.557
Mkms_1569
PFAM: methylenetetrahydrofolate reductase; KEGG: mmc:Mmcs_1546 methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
  
 0.539
Mkms_0908
KEGG: mmc:Mmcs_0891 putative monooxygenase.
 
    0.477
Mkms_3569
PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: mpa:MAP2148 hypothetical protein; Belongs to the 'phage' integrase family.
  
    0.433
Mkms_3568
Hypothetical protein.
       0.421
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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