STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_3722KEGG: mmc:Mmcs_3649 hypothetical protein. (231 aa)    
Predicted Functional Partners:
Mkms_4896
KEGG: mmc:Mmcs_4810 putative protease.
 
   
 0.759
Mkms_2495
KEGG: mmc:Mmcs_2450 hypothetical protein.
  
     0.751
Mkms_2263
KEGG: mmc:Mmcs_2217 putative conserved integral membrane protein.
  
     0.733
Mkms_0660
KEGG: mmc:Mmcs_0647 hypothetical protein.
  
     0.711
Mkms_5133
KEGG: mmc:Mmcs_5045 hypothetical protein.
  
     0.711
Mkms_5100
PFAM: cutinase; KEGG: mmc:Mmcs_5012 cutinase.
 
   
 0.710
Mkms_4560
KEGG: mmc:Mmcs_4473 putative conserved exported protein.
  
     0.702
Mkms_1976
KEGG: mmc:Mmcs_1930 putative conserved secreted protein.
  
     0.688
Mkms_5463
PFAM: protein of unknown function DUF1707; KEGG: mmc:Mmcs_5374 protein of unknown function DUF1707.
 
   
 0.678
Mkms_4108
KEGG: mmc:Mmcs_4033 hypothetical protein.
  
     0.665
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.