STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_3766KEGG: mmc:Mmcs_3693 hypothetical protein. (316 aa)    
Predicted Functional Partners:
Mkms_3763
PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: mmc:Mmcs_3690 respiratory-chain NADH dehydrogenase domain, 51 kDa subunit.
  
 
 0.945
Mkms_3764
KEGG: mmc:Mmcs_3691 hypothetical protein.
 
     0.939
Mkms_3765
PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_3692 protein of unknown function DUF35.
 
   
 0.936
Mkms_3767
PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_3694 6-phosphogluconate dehydrogenase, NAD-binding protein.
 
     0.890
Mkms_3768
PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_3695 6-phosphogluconate dehydrogenase, NAD-binding protein.
       0.874
Mkms_1821
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_1774 amidohydrolase 2.
 
     0.773
Mkms_3761
KEGG: mmc:Mmcs_3688 hypothetical protein.
 
   
 0.773
Mkms_3729
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3656 amidohydrolase 2.
 
     0.772
Mkms_3828
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3755 transcriptional regulator, TetR family.
  
     0.767
Mkms_2346
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2299 amidohydrolase 2.
 
     0.763
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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