STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_3821KEGG: mmc:Mmcs_3748 hypothetical protein. (114 aa)    
Predicted Functional Partners:
Mkms_3820
PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_3747 Rieske (2Fe-2S) region.
       0.874
Mkms_3819
PFAM: Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_3746 carboxymuconolactone decarboxylase.
       0.788
Mkms_3823
KEGG: mmc:Mmcs_3750 hypothetical protein.
       0.750
Mkms_3824
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_3751 acyl-CoA dehydrogenase-like protein.
       0.750
Mkms_3825
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3752 acyl-CoA dehydrogenase-like protein.
       0.750
Mkms_3818
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3745 amidohydrolase 2.
       0.624
Mkms_3822
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: mmc:Mmcs_3749 amidohydrolase.
       0.586
Mkms_3817
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3744 acyl-CoA dehydrogenase-like protein.
       0.561
Mkms_3814
KEGG: mmc:Mmcs_3741 acetyl-CoA C-acyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.489
Mkms_3816
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3743 short-chain dehydrogenase/reductase SDR.
       0.422
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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