Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Mkms_3875 | Mkms_3876 | PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mmc:Mmcs_3802 HNH endonuclease. | KEGG: mmc:Mmcs_3803 hypothetical protein. | 0.773 |
Mkms_3875 | Mkms_3877 | PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mmc:Mmcs_3802 HNH endonuclease. | KEGG: mmc:Mmcs_3804 hypothetical protein. | 0.745 |
Mkms_3875 | Mkms_3878 | PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mmc:Mmcs_3802 HNH endonuclease. | PFAM: phage major capsid protein, HK97; KEGG: mmc:Mmcs_3805 phage major capsid protein, HK97. | 0.418 |
Mkms_3876 | Mkms_3875 | KEGG: mmc:Mmcs_3803 hypothetical protein. | PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mmc:Mmcs_3802 HNH endonuclease. | 0.773 |
Mkms_3876 | Mkms_3877 | KEGG: mmc:Mmcs_3803 hypothetical protein. | KEGG: mmc:Mmcs_3804 hypothetical protein. | 0.737 |
Mkms_3877 | Mkms_3875 | KEGG: mmc:Mmcs_3804 hypothetical protein. | PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mmc:Mmcs_3802 HNH endonuclease. | 0.745 |
Mkms_3877 | Mkms_3876 | KEGG: mmc:Mmcs_3804 hypothetical protein. | KEGG: mmc:Mmcs_3803 hypothetical protein. | 0.737 |
Mkms_3877 | Mkms_3878 | KEGG: mmc:Mmcs_3804 hypothetical protein. | PFAM: phage major capsid protein, HK97; KEGG: mmc:Mmcs_3805 phage major capsid protein, HK97. | 0.435 |
Mkms_3878 | Mkms_3875 | PFAM: phage major capsid protein, HK97; KEGG: mmc:Mmcs_3805 phage major capsid protein, HK97. | PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mmc:Mmcs_3802 HNH endonuclease. | 0.418 |
Mkms_3878 | Mkms_3877 | PFAM: phage major capsid protein, HK97; KEGG: mmc:Mmcs_3805 phage major capsid protein, HK97. | KEGG: mmc:Mmcs_3804 hypothetical protein. | 0.435 |