STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_3911PFAM: protein of unknown function DUF309; KEGG: mmc:Mmcs_3837 protein of unknown function DUF309. (159 aa)    
Predicted Functional Partners:
Mkms_3912
KEGG: mmc:Mmcs_3838 hypothetical protein.
       0.774
Mkms_3909
PFAM: regulatory protein, LacI; KEGG: mmc:Mmcs_3835 transcriptional regulator, LacI family.
       0.631
Mkms_3910
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_3836 general substrate transporter.
       0.631
Mkms_3915
KEGG: mmc:Mmcs_3841 hypothetical protein.
 
    0.609
Mkms_3913
KEGG: mmc:Mmcs_3839 hypothetical protein.
 
     0.557
Mkms_4096
PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_4021 NUDIX hydrolase.
      0.522
Mkms_3914
KEGG: mmc:Mmcs_3840 lipoprotein, putative.
       0.498
Mkms_0555
PFAM: NUDIX hydrolase; KEGG: mmc:Mmcs_0543 NUDIX hydrolase; Belongs to the Nudix hydrolase family.
  
     0.459
Mkms_3907
SMART: protein of unknown function DUF227; KEGG: mmc:Mmcs_3833 protein of unknown function DUF227.
       0.456
Mkms_3908
PFAM: cytochrome P450; KEGG: mmc:Mmcs_3834 cytochrome P450.
       0.453
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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