STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_4043KEGG: mmc:Mmcs_3969 nuclease (RecB family)-like protein. (1143 aa)    
Predicted Functional Partners:
Mkms_4042
LprE; KEGG: mmc:Mmcs_3968 LprE.
  
  
 0.934
Mkms_4428
KEGG: mmc:Mmcs_4342 hypothetical protein.
  
    0.725
Mkms_2739
KEGG: mmc:Mmcs_2695 hypothetical protein.
  
    0.708
Mkms_4040
PFAM: acyltransferase 3; KEGG: mmc:Mmcs_3966 acyltransferase 3.
  
    0.704
Mkms_4930
KEGG: mmc:Mmcs_4842 hypothetical protein.
  
    0.686
Mkms_0846
PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: mmc:Mmcs_0829 ATPase associated with various cellular activities, AAA_5.
  
    0.683
deaD
ATP-dependent RNA helicase CsdA; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.
  
    0.621
Mkms_4418
PFAM: acyltransferase 3; KEGG: mmc:Mmcs_4332 acyltransferase 3.
  
    0.616
Mkms_0825
PFAM: protein of unknown function DUF262; KEGG: mmc:Mmcs_0809 protein of unknown function DUF262.
       0.566
Mkms_3340
KEGG: mmc:Mmcs_3278 hypothetical protein.
  
     0.498
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.