STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_4048PFAM: protein of unknown function DUF732; KEGG: mmc:Mmcs_3974 protein of unknown function DUF732. (122 aa)    
Predicted Functional Partners:
Mkms_1153
KEGG: mmc:Mmcs_1136 conserved hypothetical alanine and proline rich protein.
  
 
 0.769
Mkms_4049
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3975 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.564
Mkms_2322
TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: mmc:Mmcs_2275 preprotein translocase, YajC subunit.
    
 
 0.418
Mkms_2182
TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; KEGG: mmc:Mmcs_2136 (NiFe) hydrogenase maturation protein HypF.
  
  
 0.409
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.