STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_4129PFAM: protein of unknown function DUF485; KEGG: mmc:Mmcs_4054 protein of unknown function DUF485. (105 aa)    
Predicted Functional Partners:
Mkms_4130
TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: mmc:Mmcs_4055 SSS sodium solute transporter superfamily; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.995
Mkms_4128
PFAM: Na+/solute symporter; KEGG: mmc:Mmcs_4053 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.959
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
    0.719
Mkms_4131
PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_4056 major facilitator superfamily MFS_1.
       0.608
Mkms_4127
KEGG: mmc:Mmcs_4052 hypothetical protein.
 
     0.603
Mkms_4125
Signal transduction histidine kinase, LytS; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase internal region; KEGG: mmc:Mmcs_4050 signal transduction histidine kinase, LytS.
 
     0.599
Mkms_4126
PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: mmc:Mmcs_4051 response regulator receiver protein.
 
     0.596
Mkms_4525
PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_4438 AMP-dependent synthetase and ligase.
 
  
 0.506
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.486
Mkms_4297
PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_4231 AMP-dependent synthetase and ligase.
  
  
 0.454
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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