STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_4192PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_4117 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (274 aa)    
Predicted Functional Partners:
Mkms_4191
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4116 short-chain dehydrogenase/reductase SDR.
 
   
0.845
Mkms_4193
PFAM: protein of unknown function UPF0118; KEGG: mmc:Mmcs_4118 protein of unknown function UPF0118.
       0.782
Mkms_4501
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4414 short-chain dehydrogenase/reductase SDR.
 
    0.729
Mkms_4448
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility C-terminal domain; KR; KEGG: mmc:Mmcs_4362 short-chain dehydrogenase/reductase SDR.
 
    0.714
Mkms_4498
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4411 short-chain dehydrogenase/reductase SDR.
 
    0.699
Mkms_5059
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4971 short-chain dehydrogenase/reductase SDR.
 
    0.686
Mkms_0630
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0617 short-chain dehydrogenase/reductase SDR.
 
    0.676
Mkms_4189
KEGG: mmc:Mmcs_4114 putative nonspecific acid phosphatase precursor.
   
   0.666
Mkms_4190
PFAM: protein of unknown function DUF323; KEGG: mmc:Mmcs_4115 protein of unknown function DUF323.
     
 0.650
Mkms_4768
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_4682 short-chain dehydrogenase/reductase SDR.
 
    0.648
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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