STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_4428KEGG: mmc:Mmcs_4342 hypothetical protein. (89 aa)    
Predicted Functional Partners:
Mkms_4930
KEGG: mmc:Mmcs_4842 hypothetical protein.
  
  
 0.833
Mkms_2739
KEGG: mmc:Mmcs_2695 hypothetical protein.
 
    0.794
Mkms_0818
KEGG: mmc:Mmcs_0803 conserved hypothetical protein, putative DNA helicase.
 
    0.786
Mkms_4427
PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_4341 major facilitator superfamily MFS_1.
  
    0.752
Mkms_4043
KEGG: mmc:Mmcs_3969 nuclease (RecB family)-like protein.
  
    0.725
Mkms_4426
PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: mmc:Mmcs_4340 thiamine pyrophosphate enzyme-like TPP binding region; Belongs to the TPP enzyme family.
       0.650
Mkms_4425
TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: mmc:Mmcs_4339 ribonuclease BN, putative.
 
     0.592
Mkms_2283
PFAM: protein of unknown function DUF1469; KEGG: mmc:Mmcs_2236 protein of unknown function DUF1469.
 
     0.580
Mkms_2285
KEGG: mmc:Mmcs_2238 hypothetical protein.
  
     0.579
Mkms_4429
KEGG: mmc:Mmcs_4343 hypothetical protein.
       0.549
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.