STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_4472PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: mmc:Mmcs_4385 protein of unknown function DUF224, cysteine-rich region. (251 aa)    
Predicted Functional Partners:
Mkms_4473
TIGRFAM: iron-sulfur cluster binding protein; KEGG: mmc:Mmcs_4386 iron-sulfur cluster binding protein.
 
 0.998
Mkms_4474
PFAM: protein of unknown function DUF162; KEGG: mmc:Mmcs_4387 protein of unknown function DUF162.
 
 0.989
Mkms_4954
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: mmc:Mmcs_4865 pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
  
 0.733
Mkms_4471
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mmc:Mmcs_4384 GntR-like protein.
  
  
 0.605
Mkms_0262
TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; KEGG: mmc:Mmcs_0252 succinate dehydrogenase and fumarate reductase iron-sulfur protein.
 
 
 
 0.586
Mkms_1244
TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: mmc:Mmcs_1227 succinate dehydrogenase and fumarate reductase iron-sulfur protein.
 
 
 
 0.522
Mkms_4470
PFAM: protein of unknown function DUF849; KEGG: mmc:Mmcs_4383 protein of unknown function DUF849.
       0.508
Mkms_3434
PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_3372 FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.488
Mkms_1267
PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_1250 FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.479
Mkms_4035
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: mmc:Mmcs_3961 D-lactate dehydrogenase (cytochrome).
 
  
 0.446
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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