STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_4480PFAM: protein of unknown function DUF718; KEGG: mmc:Mmcs_4393 protein of unknown function DUF718. (108 aa)    
Predicted Functional Partners:
Mkms_4478
TIGRFAM: L-rhamnose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mmc:Mmcs_4391 rhamnose isomerase related.
 
  
 0.983
Mkms_4476
PFAM: carbohydrate kinase, FGGY; KEGG: mmc:Mmcs_4389 carbohydrate kinase, FGGY.
 
  
 0.980
Mkms_4477
TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: class II aldolase/adducin family protein; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4390 bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
  
 0.973
Mkms_4479
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_4392 major facilitator superfamily MFS_1.
 
   
 0.938
Mkms_4475
Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: mmc:Mmcs_4388 transcriptional regulator, LacI family.
 
   
 0.878
Mkms_2912
PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_2868 major facilitator superfamily MFS_1.
 
  
 0.755
xylB
TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: mmc:Mmcs_2519 xylulokinase.
 
  
 0.711
xylB-2
TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: mmc:Mmcs_2788 xylulokinase.
 
  
 0.696
Mkms_4487
PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: mmc:Mmcs_4400 oxidoreductase-like protein.
 
  
 0.682
Mkms_2467
PFAM: carbohydrate kinase, FGGY; KEGG: mmc:Mmcs_2422 carbohydrate kinase, FGGY; Belongs to the FGGY kinase family.
  
  
 0.650
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.