STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_4571KEGG: mmc:Mmcs_4484 hypothetical protein. (764 aa)    
Predicted Functional Partners:
Mkms_4572
PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_4485 type III restriction enzyme, res subunit.
 
     0.949
Mkms_4570
KEGG: mmc:Mmcs_4483 hypothetical protein.
 
     0.789
Mkms_4567
PFAM: molybdopterin biosynthesis MoaE; KEGG: mmc:Mmcs_4480 molybdopterin biosynthesis MoaE.
       0.762
moaC
GTP cyclohydrolase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
       0.762
Mkms_3193
PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein; KEGG: mmc:Mmcs_3131 protein of unknown function DUF245-like protein.
  
  
 0.698
Mkms_4568
TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; KEGG: mmc:Mmcs_4481 molybdopterin binding domain protein.
       0.654
Mkms_3424
2-oxo-acid dehydrogenase E1 subunit, homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
     
 0.603
Mkms_1334
KEGG: mmc:Mmcs_1317 hypothetical protein.
  
     0.548
Mkms_4058
KEGG: mmc:Mmcs_3984 hypothetical protein.
 
    0.545
Mkms_4620
Conserved hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands.
  
     0.543
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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