STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_4715PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_4627 AMP-dependent synthetase and ligase. (549 aa)    
Predicted Functional Partners:
Mkms_4716
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_4628 enoyl-CoA hydratase/isomerase.
 
 
 0.954
Mkms_4723
KEGG: mmc:Mmcs_4635 lipid-transfer protein.
 
 
 0.900
Mkms_4714
PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mmc:Mmcs_4626 2-nitropropane dioxygenase, NPD.
 
  
 0.851
Mkms_4724
KEGG: mmc:Mmcs_4636 acetyl-CoA acyltransferase.
 
 
 0.835
Mkms_4722
PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_4634 protein of unknown function DUF35.
 
  
 0.786
Mkms_4761
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4675 acyl-CoA dehydrogenase-like protein.
 
  
 0.712
Mkms_2878
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; phosphopantetheine-binding; KEGG: mmc:Mmcs_2834 beta-ketoacyl synthase.
 
 0.709
Mkms_2879
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: mmc:Mmcs_2835 beta-ketoacyl synthase.
 
 0.709
Mkms_4759
PFAM: MaoC domain protein dehydratase; KEGG: mmc:Mmcs_4673 MaoC-like dehydratase.
 
   
 0.705
Mkms_4764
KEGG: mmc:Mmcs_4678 acetyl-CoA C-acyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.692
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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