STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_4784PFAM: aminotransferase, class I and II; KEGG: mmc:Mmcs_4698 aminotransferase, class I and II. (395 aa)    
Predicted Functional Partners:
Mkms_4783
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4697 acyl-CoA dehydrogenase-like protein.
  
  
 0.957
Mkms_4782
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_4696 acyl-CoA dehydrogenase-like protein.
  
  
 0.946
Mkms_4781
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4695 acyl-CoA dehydrogenase-like protein.
  
  
 0.920
Mkms_4780
PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_4694 AMP-dependent synthetase and ligase.
  
  
 0.866
Mkms_4778
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4692 short-chain dehydrogenase/reductase SDR.
  
 
 0.863
Mkms_4785
KEGG: mmc:Mmcs_4699 hypothetical protein.
 
     0.787
Mkms_4779
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4693 acyl-CoA dehydrogenase-like protein.
  
  
 0.774
Mkms_4777
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4691 transcriptional regulator, TetR family.
     
 0.686
Mkms_4776
KEGG: mmc:Mmcs_4690 acetyl-CoA C-acyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.659
Mkms_3154
PFAM: Asparaginase/glutaminase; KEGG: mmc:Mmcs_3094 asparaginase/glutaminase.
 
   
 0.554
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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