STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_5140PFAM: copper resistance protein CopC; KEGG: mmc:Mmcs_5052 copper resistance protein CopC. (174 aa)    
Predicted Functional Partners:
Mkms_5141
PFAM: copper resistance D domain protein; KEGG: mmc:Mmcs_5053 copper resistance D.
 
  
 0.939
Mkms_3690
PFAM: copper resistance D domain protein; KEGG: mmc:Mmcs_3617 copper resistance D.
 
  
 0.900
Mkms_1625
PFAM: protein of unknown function DUF461; KEGG: mmc:Mmcs_1601 protein of unknown function DUF461.
  
    0.898
Mkms_5139
KEGG: mmc:Mmcs_5051 hypothetical protein.
       0.841
Mkms_3915
KEGG: mmc:Mmcs_3841 hypothetical protein.
  
    0.759
Mkms_5400
PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_5311 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
    
   0.751
Mkms_1626
TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: mmc:Mmcs_1602 Dyp-type peroxidase.
 
  
 0.744
Mkms_1624
PFAM: PepSY-associated TM helix domain protein; KEGG: mmc:Mmcs_1600 PepSY-associated TM helix.
  
    0.743
Mkms_4329
Dyp-type peroxidase family; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
  
 0.711
Mkms_0589
TIGRFAM: Dyp-type peroxidase family; KEGG: mmc:Mmcs_0577 Dyp-type peroxidase.
  
  
 0.664
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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