STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_5462KEGG: mmc:Mmcs_5373 hypothetical protein. (141 aa)    
Predicted Functional Partners:
Mkms_5461
PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: mmc:Mmcs_5372 glycosyl transferase, family 51.
     
 0.785
Mkms_3432
PFAM: UspA domain protein; KEGG: mmc:Mmcs_3370 UspA.
     
 0.748
Mkms_5460
KEGG: mmc:Mmcs_5371 hypothetical protein.
 
     0.726
Mkms_3914
KEGG: mmc:Mmcs_3840 lipoprotein, putative.
  
     0.719
Mkms_1935
PFAM: amino acid-binding ACT domain protein; KEGG: mmc:Mmcs_1889 amino acid-binding ACT.
  
     0.718
Mkms_2172
Phage shock protein A, PspA; PFAM: PspA/IM30 family protein; KEGG: mmc:Mmcs_2126 phage shock protein A, PspA.
  
     0.698
Mkms_3629
KEGG: mmc:Mmcs_3556 hypothetical protein.
  
     0.640
Mkms_4570
KEGG: mmc:Mmcs_4483 hypothetical protein.
  
     0.635
Mkms_3680
KEGG: mmc:Mmcs_3607 hypothetical protein.
  
     0.626
rpsF
SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.
       0.616
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.