STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_5479KEGG: mmc:Mmcs_5390 hypothetical protein. (297 aa)    
Predicted Functional Partners:
Mkms_5480
KEGG: mmc:Mmcs_5391 hypothetical protein.
       0.617
Mkms_1458
PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_1440 NLP/P60.
   
  
 0.615
Mkms_1465
PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_1447 NLP/P60.
   
  
 0.615
Mkms_2496
PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_2451 NLP/P60.
   
  
 0.615
leuS
TIGRFAM: leucyl-tRNA synthetase; KEGG: mmc:Mmcs_5389 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.578
Mkms_2854
Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; KEGG: mmc:Mmcs_2810 transcriptional repressor, CopY family.
      
 0.404
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.