STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
guaDGuanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family. (453 aa)    
Predicted Functional Partners:
gde
tRNA-specific adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.913
deoD
Purine-nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.908
ANW21971.1
Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
 0.906
ANW20629.1
Laccase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the multicopper oxidase YfiH/RL5 family.
     
  0.900
ANW21790.1
Hydroxyisourate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.788
ANW18724.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.729
ANW17487.1
Xanthine dehydrogenase subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.662
ANW17442.1
Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.644
alc
Allantoicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the allantoicase family.
 
  
 0.531
ANW18726.1
RNA-splicing ligase RtcB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.475
Your Current Organism:
Streptomyces clavuligerus
NCBI taxonomy Id: 1901
Other names: ATCC 27064, BCRC 11518, CBS 226.75, CCRC 11518, CCRC:11518, CECT 3125, DSM 40751, DSM 738, IFO 13307, IMET 43657, JCM 4710, KCTC 9095, NBRC 13307, NCIMB 12785, NCIMB 14335, NRRL 3585, S. clavuligerus, Streptomyces clavuligerus ATCC 27064, Streptomyces clavuligerus NRRL 3585, VKM Ac-602
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