STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCK67576.150S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)    
Predicted Functional Partners:
OCK67541.1
50S ribosomal protein L1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OCK67547.1
50S ribosomal protein L7/L12; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OCK67553.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OCK67554.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OCK67557.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OCK67558.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OCK67559.1
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OCK67560.1
50S ribosomal protein L23; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OCK67561.1
50S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OCK67562.1
30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
Your Current Organism:
Bradyrhizobium paxllaeri
NCBI taxonomy Id: 190148
Other names: B. paxllaeri, Bradyrhizobium paxllaeri Duran et al. 2014, Bradyrhizobium sp. LMTR 12, Bradyrhizobium sp. LMTR 14, Bradyrhizobium sp. LMTR 17, Bradyrhizobium sp. LMTR 21, Bradyrhizobium sp. LMTR 25, Bradyrhizobium sp. LMTR 47, DSM 18454, HAMBI 2911, strain LMTR 21
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