STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCK65040.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)    
Predicted Functional Partners:
OCK57170.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OCK65039.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OCK65038.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OCK57171.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
OCK64032.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
OCK65117.1
LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.969
OCK60950.1
LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.963
OCK60951.1
LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.957
OCK66838.1
Phosphate ABC transporter substrate-binding protein PstS; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.953
OCK67218.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.952
Your Current Organism:
Bradyrhizobium paxllaeri
NCBI taxonomy Id: 190148
Other names: B. paxllaeri, Bradyrhizobium paxllaeri Duran et al. 2014, Bradyrhizobium sp. LMTR 12, Bradyrhizobium sp. LMTR 14, Bradyrhizobium sp. LMTR 17, Bradyrhizobium sp. LMTR 21, Bradyrhizobium sp. LMTR 25, Bradyrhizobium sp. LMTR 47, DSM 18454, HAMBI 2911, strain LMTR 21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.