STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCK56325.1Selenium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)    
Predicted Functional Partners:
OCK56326.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.952
OCK64397.1
Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.900
OCK56449.1
O-succinylhomoserine sulfhydrylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.887
OCK67401.1
Methionine gamma-lyase; Catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.879
OCK57243.1
Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.879
OCK56370.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.877
OCK65347.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.771
OCK66337.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.712
OCK64417.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.710
OCK66631.1
Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.701
Your Current Organism:
Bradyrhizobium paxllaeri
NCBI taxonomy Id: 190148
Other names: B. paxllaeri, Bradyrhizobium paxllaeri Duran et al. 2014, Bradyrhizobium sp. LMTR 12, Bradyrhizobium sp. LMTR 14, Bradyrhizobium sp. LMTR 17, Bradyrhizobium sp. LMTR 21, Bradyrhizobium sp. LMTR 25, Bradyrhizobium sp. LMTR 47, DSM 18454, HAMBI 2911, strain LMTR 21
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