STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCK66458.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (232 aa)    
Predicted Functional Partners:
OCK67793.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.992
OCK65727.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.836
OCK66998.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.826
OCK64267.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.812
OCK63591.1
Two-component system sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.787
OCK64621.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.773
OCK60862.1
Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.758
OCK60384.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.756
LMTR21_00410
Transposase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.748
OCK67038.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.748
Your Current Organism:
Bradyrhizobium paxllaeri
NCBI taxonomy Id: 190148
Other names: B. paxllaeri, Bradyrhizobium paxllaeri Duran et al. 2014, Bradyrhizobium sp. LMTR 12, Bradyrhizobium sp. LMTR 14, Bradyrhizobium sp. LMTR 17, Bradyrhizobium sp. LMTR 21, Bradyrhizobium sp. LMTR 25, Bradyrhizobium sp. LMTR 47, DSM 18454, HAMBI 2911, strain LMTR 21
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