STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MK0012Uncharacterized protein conserved in archaea; Belongs to the UPF0254 family. (182 aa)    
Predicted Functional Partners:
MK0014
Uncharacterized protein conserved in archaea.
     
 0.682
MK0018
Uncharacterized protein conserved in archaea.
     
 0.659
MK0016
Predicted enzyme related to biotin synthase.
     
 0.652
hmd
N5,N10-methylenetetrahydromethanopterin dehydrogenase (H2-forming); Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT; Belongs to the HMD family.
     
 0.633
MK0017
Uncharacterized protein conserved in archaea, FLPA ortholog.
     
 0.562
MK0015
Uncharacterized conserved protein.
       0.513
MK0010
Predicted dinucleotide-utilizing enzyme of the ThiF/HesA family.
     
 0.448
Your Current Organism:
Methanopyrus kandleri
NCBI taxonomy Id: 190192
Other names: M. kandleri AV19, Methanopyrus kandleri AV19, Methanopyrus kandleri str. AV19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.