MK0304 protein (Methanopyrus kandleri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MK0304

Uncharacterized protein. (200 aa)

Predicted Functional Partners:

MK0303

0.773

MK0305

0.590

MK0302

0.431

Your Current Organism:

Methanopyrus kandleri

NCBI taxonomy Id: 190192
Other names: M. kandleri AV19, Methanopyrus kandleri AV19, Methanopyrus kandleri str. AV19

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
MK0302	MK0303	Predicted RNA-binding protein containing PIN domain, a fragment; Artificial frameshift.	Predicted cysteine protease of the transglutaminase-like superfamily.	0.431
MK0302	MK0304	Predicted RNA-binding protein containing PIN domain, a fragment; Artificial frameshift.	Uncharacterized protein.	0.431
MK0303	MK0302	Predicted cysteine protease of the transglutaminase-like superfamily.	Predicted RNA-binding protein containing PIN domain, a fragment; Artificial frameshift.	0.431
MK0303	MK0304	Predicted cysteine protease of the transglutaminase-like superfamily.	Uncharacterized protein.	0.773
MK0303	MK0305	Predicted cysteine protease of the transglutaminase-like superfamily.	Uncharacterized protein.	0.590
MK0304	MK0302	Uncharacterized protein.	Predicted RNA-binding protein containing PIN domain, a fragment; Artificial frameshift.	0.431
MK0304	MK0303	Uncharacterized protein.	Predicted cysteine protease of the transglutaminase-like superfamily.	0.773
MK0304	MK0305	Uncharacterized protein.	Uncharacterized protein.	0.590
MK0305	MK0303	Uncharacterized protein.	Predicted cysteine protease of the transglutaminase-like superfamily.	0.590
MK0305	MK0304	Uncharacterized protein.	Uncharacterized protein.	0.590