STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MK0358Ferredoxin fused to an uncharacterized conserved domain. (380 aa)    
Predicted Functional Partners:
MK0206
Uncharacterized protein conserved in archaea; Belongs to the UPF0280 family.
 
   
 0.764
MK0903
Ferredoxin.
 
  
 0.750
hypB_1
Ni2+-binding GTPase involved in regulation of expression and maturation of hydrogenase; ATPase subunit of an ABC transporter.
 
     0.430
gatC
Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit.
       0.419
Your Current Organism:
Methanopyrus kandleri
NCBI taxonomy Id: 190192
Other names: M. kandleri AV19, Methanopyrus kandleri AV19, Methanopyrus kandleri str. AV19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.