Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MK0384 | hslV_1 | MK0384 | MK0385 | Predicted exosome subunit. | Protease subunit of the proteasome; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.937 |
| MK0384 | pop5 | MK0384 | MK0386 | Predicted exosome subunit. | Predicted exosome subunit, RNase P subunit P14; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 2 family. | 0.852 |
| MK0384 | rph | MK0384 | MK0381 | Predicted exosome subunit. | Predicted exosome subunit, RNase PH; Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'->5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails. | 0.898 |
| MK0384 | rpl8A | MK0384 | MK1598 | Predicted exosome subunit. | Ribosomal protein HS6-type (S12/L30/L7a); Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.932 |
| MK0384 | rpp30 | MK0384 | MK0387 | Predicted exosome subunit. | Ribonuclease P subunit Rpp30; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family. | 0.861 |
| MK0384 | rpr2 | MK0384 | MK1622 | Predicted exosome subunit. | RNAse P subunit RPR2; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. | 0.486 |
| MK0384 | rrp4 | MK0384 | MK0382 | Predicted exosome subunit. | Predicted exosome subunit, RNA-binding protein Rrp4 (contain S1 domain and KH domain); Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome. | 0.871 |
| MK0384 | rrp42 | MK0384 | MK0380 | Predicted exosome subunit. | Predicted exosome subunit, predicted exoribonuclease related to RNase PH; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site. | 0.893 |
| hslV_1 | MK0384 | MK0385 | MK0384 | Protease subunit of the proteasome; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Predicted exosome subunit. | 0.937 |
| hslV_1 | pop5 | MK0385 | MK0386 | Protease subunit of the proteasome; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Predicted exosome subunit, RNase P subunit P14; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 2 family. | 0.848 |
| hslV_1 | rph | MK0385 | MK0381 | Protease subunit of the proteasome; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Predicted exosome subunit, RNase PH; Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'->5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails. | 0.859 |
| hslV_1 | rpl8A | MK0385 | MK1598 | Protease subunit of the proteasome; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Ribosomal protein HS6-type (S12/L30/L7a); Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.517 |
| hslV_1 | rpp30 | MK0385 | MK0387 | Protease subunit of the proteasome; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Ribonuclease P subunit Rpp30; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family. | 0.851 |
| hslV_1 | rrp4 | MK0385 | MK0382 | Protease subunit of the proteasome; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Predicted exosome subunit, RNA-binding protein Rrp4 (contain S1 domain and KH domain); Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome. | 0.843 |
| hslV_1 | rrp42 | MK0385 | MK0380 | Protease subunit of the proteasome; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Predicted exosome subunit, predicted exoribonuclease related to RNase PH; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site. | 0.892 |
| pop4_1 | pop5 | MK0846 | MK0386 | RNAse P subunit P29. | Predicted exosome subunit, RNase P subunit P14; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 2 family. | 0.902 |
| pop4_1 | rpl8A | MK0846 | MK1598 | RNAse P subunit P29. | Ribosomal protein HS6-type (S12/L30/L7a); Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.866 |
| pop4_1 | rpp30 | MK0846 | MK0387 | RNAse P subunit P29. | Ribonuclease P subunit Rpp30; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family. | 0.912 |
| pop4_1 | rpr2 | MK0846 | MK1622 | RNAse P subunit P29. | RNAse P subunit RPR2; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. | 0.915 |
| pop4_2 | pop5 | MK1216 | MK0386 | RNAse P subunit P29; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 1 family. | Predicted exosome subunit, RNase P subunit P14; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 2 family. | 0.987 |
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