STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MK1240MinD superfamily P-loop ATPase containing an inserted ferredoxin domain. (262 aa)    
Predicted Functional Partners:
MK1241
Uncharacterized conserved protein.
  
  
 0.880
MK1239
MinD superfamily P-loop ATPase containing an inserted ferredoxin domain.
 
    
0.807
MK1243
Ferredoxin.
 
     0.800
MK1242
Zn-ribbon-containing protein.
       0.773
MK0538
Coenzyme F420-reducing hydrogenase, gamma subunit.
 
 
   0.738
MK1244
Uncharacterized protein conserved in archaea.
       0.705
MK0179
Coenzyme F420-reducing hydrogenase, gamma subunit.
   
   0.696
MK0267
Coenzyme F420-reducing hydrogenase, gamma subunit.
   
   0.696
MK0930
Coenzyme F420-reducing hydrogenase, gamma subunit.
   
   0.696
MK1079
Metal-dependent hydrolase of the beta-lactamase superfamily.
 
   
 0.679
Your Current Organism:
Methanopyrus kandleri
NCBI taxonomy Id: 190192
Other names: M. kandleri AV19, Methanopyrus kandleri AV19, Methanopyrus kandleri str. AV19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.