Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MK0194 | ubiX | MK0194 | MK1465 | HD superfamily phosphohydrolase. | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.414 |
| MK1466 | ubiX | MK1466 | MK1465 | Uncharacterized membrane protein. | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.576 |
| MK1542 | ubiX | MK1542 | MK1465 | Predicted Zn-dependent hydrolase of the beta-lactamase superfamily; Belongs to the UPF0173 family. | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.443 |
| arsA | cooS | MK1680 | MK0536 | Arsenite transporting ATPase. | Carbon monoxide dehydrogenase catalytic subunit; CODH oxidizes carbon monoxide coupled, via CooF, to the reduction of a hydrogen cation by a hydrogenase (possibly CooH). | 0.622 |
| arsA | ubiX | MK1680 | MK1465 | Arsenite transporting ATPase. | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.900 |
| cooS | arsA | MK0536 | MK1680 | Carbon monoxide dehydrogenase catalytic subunit; CODH oxidizes carbon monoxide coupled, via CooF, to the reduction of a hydrogen cation by a hydrogenase (possibly CooH). | Arsenite transporting ATPase. | 0.622 |
| cooS | ubiX | MK0536 | MK1465 | Carbon monoxide dehydrogenase catalytic subunit; CODH oxidizes carbon monoxide coupled, via CooF, to the reduction of a hydrogen cation by a hydrogenase (possibly CooH). | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.622 |
| ispA | suhB | MK0774 | MK0741 | Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | Myo-inositol-1(or 4)-monophosphatase; Archaea-specific fructose-1,6-bisphosphatase fused to predicted pyrophosphatase of the PRA-PH family. | 0.523 |
| ispA | ubiA | MK0774 | MK0953 | Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | 4-hydroxybenzoate polyprenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. | 0.808 |
| ispA | ubiD | MK0774 | MK0234 | Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | Predicted decarboxylase related 3-polyprenyl-4-hydroxybenzoate decarboxylase. | 0.481 |
| ispA | ubiX | MK0774 | MK1465 | Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.484 |
| mfnA | ubiX | MK1500 | MK1465 | Pyridoxal-phosphate-dependent enzyme related to glutamate decarboxylase; Catalyzes the decarboxylation of L-tyrosine to produce tyramine for methanofuran biosynthesis. Can also catalyze the decarboxylation of L-aspartate to produce beta-alanine for coenzyme A (CoA) biosynthesis; Belongs to the group II decarboxylase family. MfnA subfamily. | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.466 |
| suhB | ispA | MK0741 | MK0774 | Myo-inositol-1(or 4)-monophosphatase; Archaea-specific fructose-1,6-bisphosphatase fused to predicted pyrophosphatase of the PRA-PH family. | Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.523 |
| suhB | ubiA | MK0741 | MK0953 | Myo-inositol-1(or 4)-monophosphatase; Archaea-specific fructose-1,6-bisphosphatase fused to predicted pyrophosphatase of the PRA-PH family. | 4-hydroxybenzoate polyprenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. | 0.573 |
| suhB | ubiX | MK0741 | MK1465 | Myo-inositol-1(or 4)-monophosphatase; Archaea-specific fructose-1,6-bisphosphatase fused to predicted pyrophosphatase of the PRA-PH family. | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.420 |
| ubiA | ispA | MK0953 | MK0774 | 4-hydroxybenzoate polyprenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. | Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.808 |
| ubiA | suhB | MK0953 | MK0741 | 4-hydroxybenzoate polyprenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. | Myo-inositol-1(or 4)-monophosphatase; Archaea-specific fructose-1,6-bisphosphatase fused to predicted pyrophosphatase of the PRA-PH family. | 0.573 |
| ubiA | ubiD | MK0953 | MK0234 | 4-hydroxybenzoate polyprenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. | Predicted decarboxylase related 3-polyprenyl-4-hydroxybenzoate decarboxylase. | 0.710 |
| ubiA | ubiX | MK0953 | MK1465 | 4-hydroxybenzoate polyprenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.710 |
| ubiD | ispA | MK0234 | MK0774 | Predicted decarboxylase related 3-polyprenyl-4-hydroxybenzoate decarboxylase. | Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.481 |
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