Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FN0117 | FN0805 | FN0117 | FN0805 | O6-methylguanine-DNA methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | Hypothetical protein. | 0.842 |
FN0804 | FN0805 | FN0804 | FN0805 | Cytochrome C-type biogenesis protein ccdA. | Hypothetical protein. | 0.434 |
FN0804 | FN0806 | FN0804 | FN0806 | Cytochrome C-type biogenesis protein ccdA. | SpoIID homolog. | 0.434 |
FN0804 | msrA-2 | FN0804 | FN0803 | Cytochrome C-type biogenesis protein ccdA. | Cytochrome C-TYPE biogenesis protein ccdA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.839 |
FN0805 | FN0117 | FN0805 | FN0117 | Hypothetical protein. | O6-methylguanine-DNA methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.842 |
FN0805 | FN0804 | FN0805 | FN0804 | Hypothetical protein. | Cytochrome C-type biogenesis protein ccdA. | 0.434 |
FN0805 | FN0806 | FN0805 | FN0806 | Hypothetical protein. | SpoIID homolog. | 0.774 |
FN0805 | msrA-2 | FN0805 | FN0803 | Hypothetical protein. | Cytochrome C-TYPE biogenesis protein ccdA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.461 |
FN0806 | FN0804 | FN0806 | FN0804 | SpoIID homolog. | Cytochrome C-type biogenesis protein ccdA. | 0.434 |
FN0806 | FN0805 | FN0806 | FN0805 | SpoIID homolog. | Hypothetical protein. | 0.774 |
msrA-2 | FN0804 | FN0803 | FN0804 | Cytochrome C-TYPE biogenesis protein ccdA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Cytochrome C-type biogenesis protein ccdA. | 0.839 |
msrA-2 | FN0805 | FN0803 | FN0805 | Cytochrome C-TYPE biogenesis protein ccdA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Hypothetical protein. | 0.461 |