STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FN1243Glycosyl transferase. (286 aa)    
Predicted Functional Partners:
FN1245
Glycosyl transferase.
  
  
 0.801
FN1241
Polysaccharide biosynthesis protein.
 
     0.789
FN1244
Polysaccharide deacetylase.
       0.778
FN1242
Polysaccharide deacetylase.
       0.752
FN1246
Lipooligosaccharide cholinephosphotransferase.
       0.732
FN1239
Hypothetical protein.
       0.721
FN1240
Lipopolysaccharide core biosynthesis protein rfaY.
       0.721
FN1247
LOS biosynthesis enzyme LBGB.
       0.708
FN1238
Hypothetical protein.
  
  
 0.702
FN1695
Probable quinovosaminephosphotransferae.
 
  
 0.662
Your Current Organism:
Fusobacterium nucleatum ATCC 25586
NCBI taxonomy Id: 190304
Other names: F. nucleatum subsp. nucleatum ATCC 25586, Fusobacterium nucleatum subsp. nucleatum ATCC 25586, Fusobacterium nucleatum subsp. nucleatum JCM 8532, Fusobacterium nucleatum subsp. nucleatum str. ATCC 25586, Fusobacterium nucleatum subsp. nucleatum strain ATCC 25586
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.