STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cynSCyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. (156 aa)    
Predicted Functional Partners:
BI347_03580
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
 
 
 0.989
BI347_02025
Carbonic anhydrase.
  
 
 0.951
BI347_03575
Transcriptional regulator CynR; Belongs to the LysR transcriptional regulatory family.
    
 0.713
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
     
 0.656
BI347_11625
Uncharacterized protein.
  
 
 0.640
BI347_00305
Uncharacterized protein.
  
 
 0.594
BI347_03590
Transporter.
       0.584
BI347_03800
Gamma carbonic anhydrase family protein.
     
 0.579
BI347_18540
Isomerase/hydrolase.
 
      0.449
Your Current Organism:
Chromobacterium sphagni
NCBI taxonomy Id: 1903179
Other names: C. sphagni, Chromobacterium sp. 14B-1, Chromobacterium sp. 37-2, Chromobacterium sphagni Blackburn et al. 2017, JCM 31882, NRRL B-67130, strain IIBBL 14B-1
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