STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BI347_08985Isochorismatase domain-containing protein. (174 aa)    
Predicted Functional Partners:
BI347_11105
Choline dehydrogenase.
  
 0.812
BI347_13110
Isochorismatase.
     
 0.793
gatA
Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
    
  0.634
nnrD
ADP-dependent (S)-NAD(P)H-hydrate dehydratase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to all [...]
  
    0.632
BI347_08990
3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.610
BI347_19490
Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.601
BI347_14525
Putative NADH dehydrogenase/NAD(P)H nitroreductase BI347_14525.
  
  
 0.596
BI347_10540
Reactive intermediate/imine deaminase.
  
 
 0.595
BI347_14985
Hydrolase.
  
     0.582
BI347_02905
2,5-didehydrogluconate reductase B.
   
 
  0.549
Your Current Organism:
Chromobacterium sphagni
NCBI taxonomy Id: 1903179
Other names: C. sphagni, Chromobacterium sp. 14B-1, Chromobacterium sp. 37-2, Chromobacterium sphagni Blackburn et al. 2017, JCM 31882, NRRL B-67130, strain IIBBL 14B-1
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