STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTN85_0190ABC-type multidrug transport system, ATPase component CcmA; arCOG00196; gene: ccmA. (348 aa)    
Predicted Functional Partners:
BTN85_0189
ABC-type multidrug transport system permease component; arCOG01467.
 
 0.968
BTN85_1953
ABC-type transport system permease involved in multi-copper enzyme maturation; arCOG02438; gene: nosY.
  
 0.854
BTN85_1614
ABC-type multidrug transport system, permease component; arCOG01463.
 
 
 0.766
BTN85_0407
ABC-type multidrug transport system permease component; arCOG01467.
 
 
 0.755
BTN85_1011
Secreted protein with PKD repeat domain; arCOG02552.
  
 0.742
BTN85_1578
ABC-type branched-chain amino acid transport system, permease component; arCOG01273; gene: livM.
   
  0.679
BTN85_1913
ABC-type transport system permease involved in multi-copper enzyme maturation; arCOG02436; gene: nosY.
 
 
 0.641
BTN85_2164
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; arCOG00181; gene: dppD.
   
 
0.596
BTN85_0238
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; arCOG00181; gene: dppD.
   
 
0.532
BTN85_0191
Transposase; arCOG03507.
       0.511
Your Current Organism:
Methanohalarchaeum thermophilum
NCBI taxonomy Id: 1903181
Other names: C. Methanohalarchaeum thermophilum, Candidatus Methanohalarchaeum thermophilum, Euryarchaeota archaeon HMET1, archaeon HMET1, strain HMET1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.