STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpBArchaeal/vacuolar-type H+-ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit. (465 aa)    
Predicted Functional Partners:
BTN85_0595
Archaeal/vacuolar-type H+-ATPase subunit I; arCOG04138; gene: ntpI; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
BTN85_0596
Archaeal/vacuolar-type H+-ATPase subunit K; arCOG02455; gene: atpK.
 
 0.999
BTN85_0598
Archaeal/vacuolar-type H+-ATPase subunit C; arCOG02459; gene: ntpC.
 
 0.999
atpE
Archaeal/vacuolar-type H+-ATPase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
BTN85_0601
Archaeal/vacuolar-type H+-ATPase subunit F; arCOG04102; gene: ntpG.
 
 0.999
atpA
Archaeal/vacuolar-type H+-ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
0.999
atpD
Archaeal/vacuolar-type H+-ATPase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
BTN85_0685
GTPase SAR1; arCOG00354.
   
 0.851
BTN85_1366
Conserved domain frequently associated with peptide methionine sulfoxide reductase; arCOG02815.
     
 0.841
BTN85_2102
Trk-type K+ transport system, membrane component; arCOG04145; gene: trkG.
    
  0.792
Your Current Organism:
Methanohalarchaeum thermophilum
NCBI taxonomy Id: 1903181
Other names: C. Methanohalarchaeum thermophilum, Candidatus Methanohalarchaeum thermophilum, Euryarchaeota archaeon HMET1, archaeon HMET1, strain HMET1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.