STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTN85_0617Pilus assembly protein TadC; arCOG01808; gene: tadC. (315 aa)    
Predicted Functional Partners:
BTN85_0618
Pilus assembly protein TadC; arCOG01808; gene: tadC.
  
 0.998
BTN85_0619
ATPase involved in archaellum/pili biosynthesis FlaI; arCOG01817; gene: flaI.
 
  
 0.962
BTN85_0740
ATPase involved in archaellum/pili biosynthesis FlaI; arCOG01817; gene: flaI.
 
  
 0.834
BTN85_0620
Surface protein, associated with type IV pili like structure; arCOG09604.
       0.773
BTN85_1688
Putative cell division protein SepF-like; arCOG02263.
  
     0.646
BTN85_1743
Cell surface protein; arCOG07560.
 
     0.639
BTN85_0569
Presenilin-like membrane protease A22 family; arCOG04463.
  
     0.528
BTN85_1717
DNA-directed RNA polymerase subunit Rpo4/RpoF; arCOG01016; gene: rpo4.
  
     0.503
top6B
DNA topoisomerase VI subunit B; Relaxes both positive and negative superturns and exhibits a strong decatenase activity.
  
     0.428
BTN85_0153
Cdc6-related protein AAA superfamily ATPase; Involved in regulation of DNA replication.
  
     0.417
Your Current Organism:
Methanohalarchaeum thermophilum
NCBI taxonomy Id: 1903181
Other names: C. Methanohalarchaeum thermophilum, Candidatus Methanohalarchaeum thermophilum, Euryarchaeota archaeon HMET1, archaeon HMET1, strain HMET1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.