STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTN85_0727Ribosome-binding ATPase YchF GTP1/OBG family; arCOG00357; gene: GTP1. (403 aa)    
Predicted Functional Partners:
argS
Arginyl-tRNA synthetase; arCOG00487; gene: argS; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 0.877
pyrG
CTP synthase (UTP-ammonia lyase) PyrG; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
   
 
 0.803
rps15
Ribosomal protein S15P; arCOG04185; gene: rpsO.
  
  
 0.796
BTN85_0721
Seryl-tRNA synthetase; arCOG00403; gene: serS.
  
  
 0.792
BTN85_0725
Secreted protein with beta-propeller repeat domain containing protein; arCOG02471.
       0.790
BTN85_0726
Hypothetical protein; arCOG05763.
       0.783
rps7
Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.778
BTN85_0113
Ribonucleotide reductase alpha subunit containing intein NrdA; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
     
 0.773
apgM
23-bisphosphoglycerate-independent phosphoglycerate mutase ApgM; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.772
BTN85_0717
Inosine/xanthosine triphosphate pyrophosphatase all-alpha NTP-PPase family; arCOG04184; gene: rdgB; Belongs to the HAM1 NTPase family.
    
  0.744
Your Current Organism:
Methanohalarchaeum thermophilum
NCBI taxonomy Id: 1903181
Other names: C. Methanohalarchaeum thermophilum, Candidatus Methanohalarchaeum thermophilum, Euryarchaeota archaeon HMET1, archaeon HMET1, strain HMET1
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