STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTN85_1118MFS family permease; arCOG02682. (456 aa)    
Predicted Functional Partners:
gap
Glyceraldehyde-3-phosphate dehydrogenase GapA; arCOG00493; gene: gapA.
    
 0.581
BTN85_1117
Deoxyribodipyrimidine photolyase PhrB; arCOG02840; gene: phrB; Belongs to the DNA photolyase family.
       0.542
BTN85_0685
GTPase SAR1; arCOG00354.
    
 0.518
BTN85_0133
MFS family permease; arCOG00134.
  
     0.488
BTN85_0113
Ribonucleotide reductase alpha subunit containing intein NrdA; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
   
 0.477
BTN85_1116
Putative membrane protein, Fun14 family; arCOG04811.
       0.475
BTN85_2103
Phosphoglycerate dehydrogenase SerA; arCOG01754; gene: serA; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.467
BTN85_0579
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase PucG; arCOG00082; gene: pucG.
   
 
 0.447
BTN85_0140
Aspartate-semialdehyde dehydrogenase Acd; arCOG00494; gene: asd.
    
 0.439
BTN85_0167
Ornithine/acetylornithine aminotransferase argD; arCOG00914; gene: argD; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.411
Your Current Organism:
Methanohalarchaeum thermophilum
NCBI taxonomy Id: 1903181
Other names: C. Methanohalarchaeum thermophilum, Candidatus Methanohalarchaeum thermophilum, Euryarchaeota archaeon HMET1, archaeon HMET1, strain HMET1
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