Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| eif1a | eif5a | BTN85_0468 | BTN85_0605 | Translation initiation factor 1 (IF-1); Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | Translation elongation factor P (EF-P)/(eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | 0.977 |
| eif1a | rpl1 | BTN85_0468 | BTN85_0054 | Translation initiation factor 1 (IF-1); Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | Ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | 0.997 |
| eif1a | rpl10 | BTN85_0468 | BTN85_0055 | Translation initiation factor 1 (IF-1); Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.998 |
| eif1a | rpl11 | BTN85_0468 | BTN85_0053 | Translation initiation factor 1 (IF-1); Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family. | 0.992 |
| eif1a | rpl12 | BTN85_0468 | BTN85_0056 | Translation initiation factor 1 (IF-1); Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | Ribosomal protein L12E; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the eukaryotic ribosomal protein P1/P2 family. | 0.970 |
| eif1a | rpl14 | BTN85_0468 | BTN85_1400 | Translation initiation factor 1 (IF-1); Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.999 |
| eif1a | rps15 | BTN85_0468 | BTN85_0718 | Translation initiation factor 1 (IF-1); Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | Ribosomal protein S15P; arCOG04185; gene: rpsO. | 0.999 |
| eif1a | rps17e | BTN85_0468 | BTN85_0066 | Translation initiation factor 1 (IF-1); Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | Ribosomal protein S17E; arCOG01885; gene: RPS17A; Belongs to the eukaryotic ribosomal protein eS17 family. | 0.999 |
| eif1a | rps24e | BTN85_0468 | BTN85_0713 | Translation initiation factor 1 (IF-1); Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | Ribosomal protein S24E; arCOG04182; gene: RPS24A; Belongs to the eukaryotic ribosomal protein eS24 family. | 0.999 |
| eif1a | rps3ae | BTN85_0468 | BTN85_0722 | Translation initiation factor 1 (IF-1); Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | Ribosomal protein S3AE; arCOG04186; gene: RPS1A; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.999 |
| eif5a | eif1a | BTN85_0605 | BTN85_0468 | Translation elongation factor P (EF-P)/(eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | Translation initiation factor 1 (IF-1); Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | 0.977 |
| eif5a | rpl1 | BTN85_0605 | BTN85_0054 | Translation elongation factor P (EF-P)/(eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | Ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release. | 0.999 |
| eif5a | rpl10 | BTN85_0605 | BTN85_0055 | Translation elongation factor P (EF-P)/(eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.959 |
| eif5a | rpl11 | BTN85_0605 | BTN85_0053 | Translation elongation factor P (EF-P)/(eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family. | 0.977 |
| eif5a | rpl12 | BTN85_0605 | BTN85_0056 | Translation elongation factor P (EF-P)/(eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | Ribosomal protein L12E; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the eukaryotic ribosomal protein P1/P2 family. | 0.921 |
| eif5a | rpl14 | BTN85_0605 | BTN85_1400 | Translation elongation factor P (EF-P)/(eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.999 |
| eif5a | rps15 | BTN85_0605 | BTN85_0718 | Translation elongation factor P (EF-P)/(eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | Ribosomal protein S15P; arCOG04185; gene: rpsO. | 0.999 |
| eif5a | rps17e | BTN85_0605 | BTN85_0066 | Translation elongation factor P (EF-P)/(eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | Ribosomal protein S17E; arCOG01885; gene: RPS17A; Belongs to the eukaryotic ribosomal protein eS17 family. | 0.897 |
| eif5a | rps24e | BTN85_0605 | BTN85_0713 | Translation elongation factor P (EF-P)/(eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | Ribosomal protein S24E; arCOG04182; gene: RPS24A; Belongs to the eukaryotic ribosomal protein eS24 family. | 0.997 |
| eif5a | rps3ae | BTN85_0605 | BTN85_0722 | Translation elongation factor P (EF-P)/(eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | Ribosomal protein S3AE; arCOG04186; gene: RPS1A; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.998 |
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